- DCP1B
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DCP1 decapping enzyme homolog B (S. cerevisiae) Identifiers Symbols DCP1B; DCP1; hDcp1b External IDs OMIM: 609843 MGI: 2442404 HomoloGene: 51881 GeneCards: DCP1B Gene Gene Ontology Molecular function • protein binding
• hydrolase activityCellular component • nucleus
• cytoplasm
• cytosolBiological process • nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
• nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
• RNA metabolic process
• mRNA metabolic process
• exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decaySources: Amigo / QuickGO RNA expression pattern More reference expression data Orthologs Species Human Mouse Entrez 196513 319618 Ensembl ENSG00000151065 ENSMUSG00000041477 UniProt Q8IZD4 n/a RefSeq (mRNA) NM_152640 NM_001033379.3 RefSeq (protein) NP_689853 NP_001028551.2 Location (UCSC) Chr 12:
2.06 – 2.11 MbChr 6:
119.13 – 119.17 MbPubMed search [1] [2] mRNA-decapping enzyme 1B is a protein that in humans is encoded by the DCP1B gene.[1][2][3]
DCP1B is a core component of the mRNA decapping complex, a key factor in the regulation of mRNA decay (Lykke-Andersen, 2002).[supplied by OMIM][3]
References
- ^ Lykke-Andersen J (Nov 2002). "Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay". Mol Cell Biol 22 (23): 8114–21. doi:10.1128/MCB.22.23.8114-8121.2002. PMC 134073. PMID 12417715. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=134073.
- ^ Cougot N, Babajko S, Seraphin B (Apr 2004). "Cytoplasmic foci are sites of mRNA decay in human cells". J Cell Biol 165 (1): 31–40. doi:10.1083/jcb.200309008. PMC 2172085. PMID 15067023. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2172085.
- ^ a b "Entrez Gene: DCP1B DCP1 decapping enzyme homolog B (S. cerevisiae)". http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=196513.
Further reading
- Beausoleil SA, Villén J, Gerber SA et al. (2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nat. Biotechnol. 24 (10): 1285–92. doi:10.1038/nbt1240. PMID 16964243.
- Rush J, Moritz A, Lee KA et al. (2005). "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells". Nat. Biotechnol. 23 (1): 94–101. doi:10.1038/nbt1046. PMID 15592455.
- Gerhard DS, Wagner L, Feingold EA et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=528928.
- Lehner B, Sanderson CM (2004). "A protein interaction framework for human mRNA degradation". Genome Res. 14 (7): 1315–23. doi:10.1101/gr.2122004. PMC 442147. PMID 15231747. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=442147.
- Ota T, Suzuki Y, Nishikawa T et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
- Strausberg RL, Feingold EA, Grouse LH et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=139241.
Nuclear Precursor mRNA · 5' cap formation · Polyadenylation (CPSF, CstF, PAP, PAB2, CFI, CFII) · Poly(A)-binding protein
RNA splicing: intron/exon · snRNP · spliceosome (minor spliceosome, U1) · alternative splicing · pre-mRNA processing factor (PLRG1, PRPF3, PRPF4, PRPF4B, PRPF6, PRPF8, PRPF18, PRPF19, PRPF31, PRPF38A, PRPF38B, PRPF39, PRPF40A, PRPF40B)
RNA editing · PolyuridylationCytosolic see also disorders of transcription and post transcriptional modification
B bsyn: dna (repl, cycl, reco, repr) · tscr (fact, tcrg, nucl, rnat, rept, ptts) · tltn (risu, pttl, nexn) · dnab, rnab/runp · stru (domn, 1°, 2°, 3°, 4°)Categories:- Human proteins
- Chromosome 12 gene stubs
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