Critical Assessment of Prediction of Interactions

Critical Assessment of Prediction of Interactions

Critical Assessment of Prediction of Interactions (CAPRI) is a community-wide experiment in modelling the molecular structure of protein complexes, otherwise known as protein–protein docking.

The CAPRI[1] is an ongoing series of events in which researchers throughout the community attempt to dock the same proteins, as provided by the assessors. Rounds take place about every six months. Each round contains between one and six target protein–protein complexes whose structures have been recently determined experimentally. The coordinates and are held privately by the assessors, with the co-operation of the structural biologists who determined them. The CAPRI experiment is double-blind, in the sense that the submittors do not know the solved structure, and the assessors do not know the correspondence between a submission and the identity of its creator.

Contents

List of predictions servers participating in CAPRI

See also

  • Critical Assessment of Techniques for Protein Structure Prediction (CASP) — a similar exercise in the field of protein structure prediction

References

  1. ^ Janin J, Henrick K, Moult J, Eyck LT, Sternberg MJ, Vajda S, Vakser I, Wodak SJ (2003). "CAPRI: a Critical Assessment of PRedicted Interactions". Proteins 52 (1): 2–9. doi:10.1002/prot.10381. PMID 12784359. 

External links


Wikimedia Foundation. 2010.

Игры ⚽ Поможем написать реферат

Look at other dictionaries:

  • Rosetta@home — infobox software name = Rosetta@home caption = Rosetta@home screensaver for CASP 8 target [http://predictioncenter.gc.ucdavis.edu/casp8/target.cgi?id=119 view=all T0482] developer = Baker laboratory, University of Washington; Rosetta Commons… …   Wikipedia

  • Macromolecular docking — is the computational modelling of the molecular structure of complexes formed by two or more interacting biological macromolecules. Protein protein complexes are the most commonly attempted targets, followed increasingly by protein nucleic acid… …   Wikipedia

  • personality assessment — ▪ psychology Introduction       the measurement of personal characteristics. Assessment is an end result of gathering information intended to advance psychological theory and research and to increase the probability that wise decisions will be… …   Universalium

  • CASP — A target structure (ribbons) and 354 template based predictions superimposed (gray Calpha backbones); from CASP8 CASP, which stands for Critical Assessment of Techniques for Protein Structure Prediction, is a community wide, worldwide experiment… …   Wikipedia

  • Capri (disambiguation) — Capri can refer to: * Capri, an Italian island in the Gulf of Naples * Capri (NA), the main town of the island * Capri Theatre a cinema in South Australia * Jordan Capri, a nude teen model * Critical Assessment of Prediction of Interactions, a… …   Wikipedia

  • Industrial and organizational psychology — Psychology …   Wikipedia

  • Homology modeling — Homology modeling, also known as comparative modeling of protein refers to constructing an atomic resolution model of the target protein from its amino acid sequence and an experimental three dimensional structure of a related homologous protein… …   Wikipedia

  • Geophysical MASINT — is a branch of Measurement and Signature Intelligence (MASINT) that involves phenomena transmitted through the earth (ground, water, atmosphere) and manmade structures including emitted or reflected sounds, pressure waves, vibrations, and… …   Wikipedia

  • Race (classification of humans) — Race Classification Race (classification of humans) Genetics …   Wikipedia

  • Tertiary structure — In biochemistry and chemistry, the tertiary structure of a protein or any other macromolecule is its three dimensional structure, as defined by the atomic coordinates. [GoldBookRef|title=tertiary structure|file=T06282] Relationship to primary… …   Wikipedia

Share the article and excerpts

Direct link
Do a right-click on the link above
and select “Copy Link”