Haploview

Haploview [cite journal|author=Barrett J.C., Fry B., Maller J., Daly M.J.|title=Haploview: analysis and visualization of LD and haplotype maps|journal=Bioinformatics|year=2005|volume=21|pages=263–265|url=http://bioinformatics.oxfordjournals.org/cgi/reprint/21/2/263?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=&fulltext=haploview&searchid=1&FIRSTINDEX=0&resourcetype=HWCIT|doi=10.1093/bioinformatics/bth457|pmid=15297300] is a commonly used bioinformatics software tool which is designed to analyze and visualize patterns of linkage disequilibrium in genetic data. Haploview also provides functionality for performing association studies, choosing tagSNPs [cite journal|author=de Bakker P. I., Yelensky R., Pe'er I., Gabriel S. B., Daly M. J., Altshuler D.|title=Efficiency and power in genetic association studies.|journal=Nature Genetics|year=2005|volume=37|pages=1217–1223|url=http://www.nature.com/ng/journal/v37/n11/pdf/ng1669.pdf|doi=10.1038/ng1669] and estimating haplotype frequencies. Haploview is developed and maintained by Dr. Mark Daly's lab at the MIT/Harvard Broad Institute.

References

External links

[http://www.broad.mit.edu/mpg/haploview/ Haploview Homepage]