Align-m

Align-m

Align-m is a multiple sequence alignment program written by Ivo Van Walle.

Align-m has the ability to accomplish the following tasks:
* Multiple sequence alignment
* Include extra information to guide the sequence alignment
* Multiple structural alignment
* Homology modeling by (iteratively) combining sequence and structure alignment data
* 'Filtering' of BLAST or other pairwise alignments
* Combining many alignments into one consensus sequence
* Multiple genome alignment (can cope with rearrangements)

See also

* Sequence alignment software
* Clustal

External links

* [http://bioinformatics.vub.ac.be/software/software.html Official website]


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  • align — align; align·er; align·ment; re·align; …   English syllables

  • align — UK US /əˈlaɪn/ verb [T] ► to change something so that it has a correct relationship to something else: »Later this year, the company will introduce a price platform for its home insurance contracts, and will align all its prices. align sth with… …   Financial and business terms

  • Align — may refer to:* The process of alignment * Align (company) …   Wikipedia

  • align — [v1] line up, arrange next to adjust, allineate, coordinate, even, even up, fix, make parallel, order, range, regulate, straighten; concept 158 Ant. divide, mess up, separate align [v2] join; bring to agreement affiliate, agree, ally, associate,… …   New thesaurus

  • align — ► VERB 1) place or arrange in a straight line or into correct relative positions. 2) (align oneself with) ally oneself to. DERIVATIVES alignment noun. ORIGIN French aligner, from à ligne into line …   English terms dictionary

  • Align — A*lign , v. t. [F. aligner; [ a] (L. ad) + ligne (L. linea) line. See {Line}, and cf. {Allineate}.] To adjust or form to a line; to range or form in line; to bring into line; to aline. [1913 Webster] …   The Collaborative International Dictionary of English

  • Align — A*lign , v. t. To form in line; to fall into line. [1913 Webster] …   The Collaborative International Dictionary of English

  • align — I verb accommodate, adapt, adjust, ameliorate, amend, attune, change, collimate, conform, correct, cure, improve, level, line up, make uniform, modify, normalize, pattern, perfect, readjust, rectify, regularize, remedy, revise II index conform,… …   Law dictionary

  • align — (v.) early 15c., to copulate (of wolves, dogs), lit. to range (things) in a line, from M.Fr. aligner, from O.Fr. alignier set, lay in line, from à to (see AD (Cf. ad )) + lignier to line, from L. lineare, from linea (see LINE (Cf …   Etymology dictionary

  • align — *line, line up, range, array Analogous words: *order, arrange, marshal: regulate, fix, *adjust Contrasted words: *disorder, disarrange, derange, unsettle …   New Dictionary of Synonyms

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